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Fast Interactive Genomics Data Visualization in AltAnalyze

Nathan Salomonis, Ph.D.

Salomonis Sept18Webinarregister

Assistant Professor
Division of Biomedical Informatics
Cincinnati Children’s Hospital Medical Center

September 13, 2018 at 1:00pm EST

 

  

  

 

 

Nathan Salomonis, PhD, Assistant Professor of Biomedical Informatics at Cincinnati Children’s Hospital Medical Center.  Dr. Salomonis and his group are on the cutting edge of developing new software and algorithms to identify complex functional relationships from whole transcriptome data. They have developed several open source analysis tools including AltAnalyze, LineageProfiler, GO-Elite, and NetPerspective. With the onslaught of new approaches to measure genomic states, including single-cell genomics and alternative splicing, accessible tools for data visualization and analysis are required by both bioinformaticians and non-computational biologists alike.  In this webinar we will walk through various tools within the software AltAnalyze, pre-compiled for Mac and Windows, to visualize genomics datasets. In particular we will learn to apply approaches for hierarchical clustering, pathway visualization, dimensionality reduction and network analysis. The goal of this webinar is to have you immediately use these techniques to visualize and analyze your own data. Available software can be found at http://www.altanalyze.org. We recommend you download, extract and follow the instructions for downloading the species databases before the webinar. However, you are welcome to do this afterwards. For issues, contact: This email address is being protected from spambots. You need JavaScript enabled to view it..

Presentation - 

The presentation, entitled, "Fast interactive genomics data visualization in AltAnalyze," is a new and unique presentation for the NAVBO webinar audience.

For some background information, you may want to reveiw this protocols paper:
https://link.springer.com/protocol/10.1007%2F7651_2017_94

and/or review these tutorials:
http://altanalyze.readthedocs.io/en/latest/Tutorials/

If you plan to register, we encourage you to download AltAnalyze at http://www.altanalyze.org prior to the webinar.

Click here to register now!

All participants will be required to register. Current NAVBO members in good standing can register for free, however, the registration form must be completed.  Non-members will be charged a $25 fee for each webinar.  Once registration is complete, each registrant will receive a link and unique pin to join the meeting.  We are using GoToWebinar.  The confirmation email will include information about accessing the webinar.

If you have any questions, please contact This email address is being protected from spambots. You need JavaScript enabled to view it.